Cell type

A cell type is a classification used to identify cells that share morphological or phenotypical features.[1] A multicellular organism may contain cells of a number of widely differing and specialized cell types, such as muscle cells and skin cells, that differ both in appearance and function yet have identical genomic sequences. Cells may have the same genotype, but belong to different cell types due to the differential regulation of the genes they contain. Classification of a specific cell type is often done through the use of microscopy (such as those from the cluster of differentiation family that are commonly used for this purpose in immunology). Recent developments in single cell RNA sequencing facilitated classification of cell types based on shared gene expression patterns. This has led to the discovery of many new cell types in e.g. mouse cortex, hippocampus,[2] dorsal root ganglion[3] and spinal cord.[4]

Animals have evolved a greater diversity of cell types in a multicellular body (100–150 different cell types), compared with 10–20 in plants, fungi, and protists.[5] The exact number of cell types is, however, undefined, and the Cell Ontology, as of 2021, lists over 2,300 different cell types.[6]

  1. ^ Zeng, Hongkui (2022). "What is a cell type and how to define it?". Cell. 185 (15): 2739–2755. doi:10.1016/j.cell.2022.06.031. ISSN 0092-8674. PMC 9342916. PMID 35868277.
  2. ^ Zeisel A, Muñoz-Manchado AB, Codeluppi S, Lönnerberg P, La Manno G, Juréus A, Marques S, Munguba H, He L, Betsholtz C, Rolny C, Castelo-Branco G, Hjerling-Leffler J, Linnarsson S (March 2015). "Brain structure. Cell types in the mouse cortex and hippocampus revealed by single-cell RNA-seq". Science. 347 (6226): 1138–42. doi:10.1126/science.aaa1934. PMID 25700174. S2CID 29506785.
  3. ^ Usoskin D, Furlan A, Islam S, Abdo H, Lönnerberg P, Lou D, Hjerling-Leffler J, Haeggström J, Kharchenko O, Kharchenko PV, Linnarsson S, Ernfors P (January 2015). "Unbiased classification of sensory neuron types by large-scale single-cell RNA sequencing". Nature Neuroscience. 18 (1): 145–53. doi:10.1038/nn.3881. PMID 25420068. S2CID 205437148.
  4. ^ Häring M, Zeisel A, Hochgerner H, Rinwa P, Jakobsson JE, Lönnerberg P, La Manno G, Sharma N, Borgius L, Kiehn O, Lagerström MC, Linnarsson S, Ernfors P (June 2018). "Neuronal atlas of the dorsal horn defines its architecture and links sensory input to transcriptional cell types". Nature Neuroscience. 21 (6): 869–880. doi:10.1038/s41593-018-0141-1. PMID 29686262. S2CID 5057143.
  5. ^ Margulis L; Chapman MJ (2009). Kingdoms and Domains: An Illustrated Guide to the Phyla of Life on Earth (4th ed.). Amsterdam: Academic Press/Elsevier. p. 116.
  6. ^ Osumi-Sutherland, David; Xu, Chuan; Keays, Maria; Kharchenko, Peter V.; Regev, Aviv; Lein, Ed; Teichmann, Sarah A. (2021-06-28). "Cell type ontologies of the Human Cell Atlas". Nature Cell Biology. 23 (11): 1129–1135. arXiv:2106.14443. doi:10.1038/s41556-021-00787-7. PMID 34750578. S2CID 235658396.

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