Conserved Domain Database

CDD
Content
Description	Conserved Domain Database for the functional annotation of proteins.
Contact
Research center	National Center for Biotechnology Information
Authors	Aron Marchler-Bauer
Primary citation	Marchler-Bauer & al. (2013)
Release date	2003
Access
Website	https://www.ncbi.nlm.nih.gov/Structure/cdd/cdd.shtml

The Conserved Domain Database (CDD) is a database of well-annotated multiple sequence alignment models and derived database search models, for ancient domains and full-length proteins.^[1] The database consists of position-specific score matrices and serves as resource for protein annotation such as identification of conserved domain or inference of functional site.^[2]

^ ^a ^b Marchler-Bauer, A.; Zheng, C.; Chitsaz, F.; Derbyshire, M. K.; Geer, L. Y.; Geer, R. C.; Gonzales, N. R.; Gwadz, M.; Hurwitz, D. I.; Lanczycki, C. J.; Lu, F.; Lu, S.; Marchler, G. H.; Song, J. S.; Thanki, N.; Yamashita, R. A.; Zhang, D.; Bryant, S. H. (2012). "CDD: Conserved domains and protein three-dimensional structure". Nucleic Acids Research. 41 (Database issue): D348 – D352. doi:10.1093/nar/gks1243. PMC 3531192. PMID 23197659.
^ Marchler-Bauer, Aron; Lu, Shennan; Anderson, John B.; Chitsaz, Farideh; Derbyshire, Myra K.; DeWeese-Scott, Carol; Fong, Jessica H.; Geer, Lewis Y.; Geer, Renata C.; Gonzales, Noreen R.; Gwadz, Marc; Hurwitz, David I.; Jackson, John D.; Ke, Zhaoxi; Lanczycki, Christopher J. (2011-01-01). "CDD: a Conserved Domain Database for the functional annotation of proteins". Nucleic Acids Research. 39 (suppl_1): D225 – D229. doi:10.1093/nar/gkq1189. ISSN 0305-1048. PMC 3013737.

[CDD_reference-1] Marchler-Bauer, A.; Zheng, C.; Chitsaz, F.; Derbyshire, M. K.; Geer, L. Y.; Geer, R. C.; Gonzales, N. R.; Gwadz, M.; Hurwitz, D. I.; Lanczycki, C. J.; Lu, F.; Lu, S.; Marchler, G. H.; Song, J. S.; Thanki, N.; Yamashita, R. A.; Zhang, D.; Bryant, S. H. (2012). "CDD: Conserved domains and protein three-dimensional structure". Nucleic Acids Research. 41 (Database issue): D348 – D352. doi:10.1093/nar/gks1243. PMC 3531192. PMID 23197659.

[2] Marchler-Bauer, Aron; Lu, Shennan; Anderson, John B.; Chitsaz, Farideh; Derbyshire, Myra K.; DeWeese-Scott, Carol; Fong, Jessica H.; Geer, Lewis Y.; Geer, Renata C.; Gonzales, Noreen R.; Gwadz, Marc; Hurwitz, David I.; Jackson, John D.; Ke, Zhaoxi; Lanczycki, Christopher J. (2011-01-01). "CDD: a Conserved Domain Database for the functional annotation of proteins". Nucleic Acids Research. 39 (suppl_1): D225 – D229. doi:10.1093/nar/gkq1189. ISSN 0305-1048. PMC 3013737.

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