Long branch attraction

In phylogenetics, long branch attraction (LBA) is a form of systematic error whereby distantly related lineages are incorrectly inferred to be closely related.[1] LBA arises when the amount of molecular or morphological change accumulated within a lineage is sufficient to cause that lineage to appear similar (thus closely related) to another long-branched lineage, solely because they have both undergone a large amount of change, rather than because they are related by descent. Such bias is more common when the overall divergence of some taxa results in long branches within a phylogeny. Long branches are often attracted to the base of a phylogenetic tree, because the lineage included to represent an outgroup is often also long-branched. The frequency of true LBA is unclear and often debated,[1][2][3] and some authors view it as untestable and therefore irrelevant to empirical phylogenetic inference.[4] Although often viewed as a failing of parsimony-based methodology, LBA could in principle result from a variety of scenarios and be inferred under multiple analytical paradigms.

  1. ^ a b Bergsten, Johannes (2005-04-01). "A review of long-branch attraction". Cladistics. 21 (2): 163–193. doi:10.1111/j.1096-0031.2005.00059.x. ISSN 1096-0031. PMID 34892859. S2CID 55273819.
  2. ^ Anderson, F. E., & Swofford, D. L. (2004). Should we be worried about long-branch attraction in real data sets? Investigations using metazoan 18S rDNA. Molecular Phylogenetics and Evolution, 33(2), 440-451.
  3. ^ Huelsenbeck, J. P. (1997). Is the Felsenstein zone a fly trap?. Systematic Biology, 46(1), 69-74.
  4. ^ Brower, AVZ. 2017. Statistical consistency and phylogenetic inference: a brief review. Cladistics, 34(5), 562-567 (DOI: 10.1111/cla.12216).

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